En I עב
search
People | Site
Hello visitor | Log in
STATE OF ISRAEL I MINISTRY OF AGRICULTURE AND RURAL DEVELOPMENT   
research_title.gif research_logo.gif
About Institutes Public Relations Technology Transfer Students\International Library Administration
Volcani Center Bioinformatics Unit
About
*Our Services
Fee
Publications in the last 5 years
Useful links
Contacts
Our Services

 

Transcriptome Sequences assembly: De-novo transcriptome assembly of non-model species based on next generation sequencing from Illumine technology.

Annotation of Transcriptome : Transcripts annotation based on sequences similarity to available database sequences (i.e.: NCBI databases and UniProt)

RNA-Seq analysis : Differential expression analysis and cluster analysis. Functional analysis of the differentially expressed genes, including GO term, and pathway enrichment analysis.

Genotype By Sequencing (GBS) data analysis: Genome-wide SNP discovery by combining the power of multiplexed NGS. Tassel-GBS pipeline is used for the analysis.   

Variant Calling: Variant calling or SNP discovery based on NGS data. Quality control and filter steps are performed to provide reliable data.

Phylogenetic analysis: Evolution and relationships among genes and species can draw from multiple data sources.  

Metagenomic analysis: Identification of microbial and fungi communities from sequences of 16S/18S rRNA and from metagenomic sequencing data.

 

 

Updated on: 28/06/16 12:35
govi semel
Copyright © 2008, The State of Israel. All Rights Reserved. Terms of use I Contact Us I Jobs I F.A.Q I Site administrator